曲小健

日期: 2022/06/10 作者: 浏览量:



个人简介

曲小健,男,中共党员,副教授,硕士生导师。

围绕寄生植物、裸子植物、禾本科和蓼科植物等植物类群进行了一系列的研究工作,主要利用基因组和转录组数据以及形态学数据开展植物分类、系统发育和进化生物学研究,另外基于生物信息学方法开发实用的基因组学分析软件和工具。在Nature PlantsMolecular Phylogenetics and EvolutionPlant MethodsGenome Biology and EvolutionFrontiers in Plant SciencePlant Disease等本领域主流期刊上发表SCI论文20余篇,其中高水平论文1篇,ESI高被引论文1篇。SCI文章被引600余次。


工作经历

2022.1-至今,122cc太阳集成游戏,副教授

2018.9-2021.12,122cc太阳集成游戏,讲师

2017.9-2018.8,中科院昆明植物研究所,助理研究员

教育经历

2014.9-2017.7,中科院昆明植物研究所,生物化学与分子生物学,博士

2011.9-2014.7,中科院昆明植物研究所,植物学,硕士

2007.09-2011.7,122cc太阳集成游戏,生物技术,学士


研究兴趣和方向

1、结合组学和形态学数据进行植物分类和系统发育基因组学研究,同时解析叶绿体基因组和核基因组的结构进化模式。

2、研究寄生植物适应异养生活方式的进化机制。

3、利用生物信息学方法开发基因组学分析软件和工具。


承担课程

本科生:植物学实验、园林植物学、野外实习

研究生:孢子植物学


主持或参与科研项目情况

1、山东省自然科学基金,结合叶绿体基因组和微条形码研究裸子植物的系统发育关系,2021.1-2023.12,在研,主持。

2、中国博士后科学基金,基于组学数据的裸子植物系统发育和进化研究,2019.7-2021.7,结题,主持。

3、中国科学院“西部青年学者”项目,裸子植物叶绿体基因组系统发育和结构演化研究,2018.1-2020.12,结题,主持。

4、国家自然科学基金国际(地区)合作与交流项目,蔷薇目全球多样化时空格局重建,2018.1-2022.12,在研,参与。

5、国家自然科学基金面上项目,中缅交界高黎贡山种子植物区系及形成原因的进化与生态解释,2016.1-2019.12,结题,参与。

6、国家自然科学基金面上项目,滇藏交界独龙江上游地区种子植物区系与生物多样性保护研究,2014.10-2017.12,结题,参与。

7、国家自然科学基金青年科学基金项目,鼠李科的系统发育研究,2013.1-2015.12,结题,参与。


代表性论文

1. Xiao-Jian Qu, Xue-Jie Zhang, Dong-Ling Cao, Xiu-Xiu Guo, Jeffrey P. Mower*, Shou-Jin Fan*. Plastid and mitochondrial phylogenomics reveal correlated substitution rate variation in Koenigia (Polygonoideae, Polygonaceae) and a reduced plastome for Koenigia delicatula including loss of all ndh genes. Molecular Phylogenetics and Evolution, 2022, https://doi.org/10.1016/j.ympev.2022.107544.

2. Gregory W. Stull, Xiao-Jian Qu, Caroline Parins-Fukuchi, Ying-Ying Yang, Jun-Bo Yang, Zhi-Yun Yang, Yi Hu, Hong Ma, Pamela S. Soltis, Douglas E. Soltis, De-Zhu Li*, Stephen A. Smith*, Ting-Shuang Yi*. Gene duplications and phylogenomic conflict underlie major pulses of phenotypic evolution in gymnosperms. Nature Plants, 2021, 7, 1015–1025.

3. Xiao-Jian Qu, Michael J. Moore, De-Zhu Li*, Ting-Shuang Yi*. PGA: a software package for rapid, accurate, and fexible batch annotation of plastomes. Plant Methods, 2019, 15:1.

4. Xiao-Jian Qu, Shou-Jin Fan, Susann Wicke*, Ting-Shuang Yi*. Plastome reduction in the only parasitic gymnosperm Parasitaxus is due to losses of photosynthesis but not housekeeping genes and apparently involves the secondary gain of a large inverted repeat. Genome Biology and Evolution, 2019, 11(10):2789-2796.

5. Xiao-Jian Qu, Chung-Shien Wu, Shu-Miaw Chaw*, Ting-Shuang Yi*. Insights into the existence of isomeric plastomes in Cupressoideae (Cupressaceae). Genome Biology and Evolution, 2017, 9(4): 1110-1119.

6. Xiao-Jian Qu*, Shou-Jin Fan*. First report of the parasitic invasive weed field dodder (Cuscuta campestris) parasitizing the confamilial invasive weed common morning-glory (Ipomoea purpurea) in Shandong, China. Plant Disease, 2021, 105:1230.

7. Xiao-Jian Qu, Jian-Jun Jin, Shu-Miaw Chaw, De-Zhu Li*, Ting-Shuang Yi*. Multiple measures could alleviate long-branch attraction in phylogenomic reconstruction of Cupressoideae (Cupressaceae). Scientific Reports, 2017, 7: 41005.

8. Xiao-Jian Qu, Shou-Jin Fan*. First report of leaf wilt caused by Cuscuta japonica on generally insusceptible host plant Rhus typhina in China. Plant Disease, 2020, 104:11.

9. Xiao-Jian Qu, Li-Kang Liu, Luo-Yan Zhang, Xue-Jie Zhang, Shou-Jin Fan*. First report of dodder (Cuscuta japonica) parasitizing Japanese red pine (Pinus densiflora) in China. Plant Disease, 2020, 104:6.

10. Rong Wang, Kuan Liu, Xue-Jie Zhang, Wen-Li Chen, Xiao-Jian Qu*, Shou-Jin Fan*. Comparative plastomes and phylogenetic analysis of Cleistogenes and closely related genera (Poaceae). Frontiers in Plant Science, 2021, 12:638597.

11. Xiu-Xiu Guo, Xiao-Jian Qu, Xue-Jie Zhang*, Shou-Jin Fan*. Comparative and phylogenetic analysis of complete plastomes among Aristidoideae species (Poaceae). Biology, 2022, 11, 63.

12. Lei Zhao, Ying-Ying Yang, Xiao-Jian Qu, Hong Ma, Yi Hu, Hong-Tao Li, Ting-Shuang Yi*, and De-Zhu Li*. Phylotranscriptomic analyses reveal multiple whole-genome duplication events, the history of diversification and adaptations in the Araceae. Annals of Botany, 2022, mcac062, https://doi.org/10.1093/aob/mcac062.

13. Kuan Liu, Rong Wang, Xiu-Xiu Guo, Xue-Jie Zhang, Xiao-Jian Qu*, Shou-Jin Fan*. Comparative and phylogenetic analysis of complete chloroplast genomes in Eragrostideae (Chloridoideae, Poaceae). Plants, 2021, 10(1):109.

14. Ying-Ying Yang, Xiao-Jian Qu, Rong Zhang, Gregory W. Stull*, Ting-Shuang Yi*. Plastid phylogenomic analyses of Fagales reveal signatures of conflict and ancient chloroplast capture. Molecular Phylogenetics and Evolution, 2021, 163, 107232.

15. Zhi-Fang Liu, Hui Ma, Xiu-Qin Ci, Lang Li, Yu Song, Bing Liu, His-Wen Li, Shu-Li Wang, Xiao-Jian Qu, Jian-Lin Hu, Xiao-Yan Zhang, John G. Conran, Alex D. Twyford*, Jun-Bo Yang*, Peter M. Hollingsworth*, Jie Li*. Can plastid genome sequencing be used for species identification in Lauraceae? Botanical Journal of the Linnean Society, 2021, 197, 1:1-14.


代表性著作

《122cc太阳集成游戏珍藏植物科学绘图》,副主编

《122cc太阳集成游戏校园植物图志》,编委


获奖情况

122cc太阳集成游戏本科优秀毕业论文指导教师


联系方式

122cc太阳集成游戏长清湖校区博物楼A434

邮箱:quxiaojian@sdnu.edu.cn


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